Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGAGGCAGAGGTTGCAGAGAGCCGA
...((((((((((((((((...&)))))))))).............)))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047444941
GeneSymbolPRPF40A
Binding site3295,3325
Score0.923
Seed0
Au0.397
Energy-22.5
Binding len30
Me-6.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings20
Pairings in 3prime end5
Position3UTR
2D Structure