Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAAGCAGCAGCTGCT
..((((((((.(((....(((&)))..))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047444941
GeneSymbolPRPF40A
Binding site886,904
Score0.808
Seed1
Au0.382
Energy-21.7
Binding len18
Me-8.75
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure