Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&CGCCTGTTGGACAGCTTCTGCCAGAGGTGATAATA
.((((((((((((((((.((.&.))...)))))))))))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDXM_047445393
GeneSymbolSCN1A
Binding site2375,2410
Score0.872
Seed1
Au0.529
Energy-20.4
Binding len23
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure