Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCAGAGAGCCCAGTGC
((((((...(((((((((....&))))))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047445393
GeneSymbolSCN1A
Binding site1798,1815
Score0.923
Seed0
Au0.426
Energy-21.3
Binding len17
Me-8.851
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure