Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAGCCACTGATGA
...((...(.(((((((((((&))))))))))).)...)).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047445393
GeneSymbolSCN1A
Binding site3386,3405
Score1.0
Seed0
Au0.618
Energy-18.6
Binding len19
Me-13.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end8
PositionCDS
2D Structure