Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGACCCCGAGAAGCCCAGCCGCAGCTACAGCGAG
(((((((((((((((...(((&.))))))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047445555
GeneSymbolSLC4A3
Binding site314,353
Score0.942
Seed1
Au0.353
Energy-25.0
Binding len23
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure