Details of Duplex


2D Structure dot-bracket from RNAduplex"
TACTTGGAAAGGCATCAGTTG&GGCTGATGTATTTTAAGA
..(((((((..(((((((((.&))))))))).))))))).
Details
MiRNAhsa-miR-890
RefseqIDXM_047445585
GeneSymbolSOS1
Binding site5688,5706
Score0.808
Seed1
Au0.721
Energy-16.6
Binding len18
Me-9.024
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure