Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCTACAGTCAGGAGAAAGCCGAAAGCTGCAC
.(((((((.(((((((((((.&))))))..............)))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348498
GeneSymbolRIMS2
Binding site45,80
Score0.846
Seed1
Au0.544
Energy-20.5
Binding len35
Me-4.85
Phylopstem0.7147984592000003
Phylopflank0.34822529635714283
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure