Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGTTCTCCCAAACAGGCCTTTTCTCTTTAAGCTGTAGCTGTGGT
((((((((((((((..((((.&.))))..)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047445798
GeneSymbolCACNB4
Binding site163,209
Score1.0
Seed1
Au0.588
Energy-22.4
Binding len22
Me-4.906
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure