Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGACATAAAGGATTCTGAAGGGGGAGAGGTGTCCAAATCAGTGT
(((((((((((((((((((...&))))))))..................)))))...........)))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047445849
GeneSymbolCLIP4
Binding site3354,3403
Score0.923
Seed1
Au0.544
Energy-20.4
Binding len49
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings41
Pairings in 3prime end5
Position3UTR
2D Structure