Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCATATTGCAGCATACAACTTGTGTGCAGG
(((((((((((((((((((((&)))))))).))))))))............))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047445849
GeneSymbolCLIP4
Binding site1561,1596
Score0.846
Seed1
Au0.5
Energy-21.4
Binding len35
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings27
Pairings in 3prime end8
PositionCDS
2D Structure