Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCGGAGGAGGCAGGTGG
(((((.((((..(((((((...&))))))))))).))).)).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047445851
GeneSymbolCLIP4
Binding site236,255
Score0.923
Seed0
Au0.382
Energy-23.6
Binding len19
Me-12.01
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end5
Position5UTR
2D Structure