Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGGGGCTGCAACTTGCAAA
((((((.(((((((.(((((.&))))).))))))).)).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348501
GeneSymbolRIMS2
Binding site4804,4826
Score0.846
Seed0
Au0.735
Energy-20.1
Binding len22
Me-6.217
Phylopstem0.927812357142857
Phylopflank0.61433216875
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure