Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATACATTCTGTCAGCAGCTGCC
..((((((((...((..(((.&.)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047446574
GeneSymbolLOC124906010
Binding site574,598
Score0.846
Seed1
Au0.426
Energy-17.3
Binding len17
Me-12.651
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure