Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCTTACTCTCGTTCATAGCAGCTGTAAA
(((((((((((((...(((((&)))))...)))..........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348509
GeneSymbolRIMS2
Binding site4337,4369
Score0.923
Seed1
Au0.574
Energy-19.9
Binding len32
Me-5.763
Phylopstem2.704986652173914
Phylopflank2.94832173375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure