Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAGAAAGTTACAGCCAAAGCACTGCAGA
((((((.(((((((((((...&.))))))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330490
GeneSymbolCLSPN
Binding site3735,3766
Score1.0
Seed0
Au0.529
Energy-20.4
Binding len22
Me-5.481
Phylopstem3.256678074285715
Phylopflank3.3885002280000007
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure