Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATAAGAGCAGCTGTAAA
((((((((((..((((.....&))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330490
GeneSymbolCLSPN
Binding site813,830
Score1.0
Seed1
Au0.706
Energy-18.7
Binding len17
Me-10.109
Phylopstem5.711719070000001
Phylopflank2.8871265125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure