Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAATGACAACCCTGCTGCGT
.((((((.(.((((((.(((.&)))....))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348523
GeneSymbolCFAP92
Binding site1396,1418
Score0.846
Seed1
Au0.441
Energy-19.0
Binding len22
Me-7.349
Phylopstem0.112583
Phylopflank0.008088387499999981
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure