Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCGGCAGCTCACAGCCGAGCTGCGT
.(((((((.(((((((.((.(&.).)).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047447716
GeneSymbolTRAK1
Binding site946,976
Score0.923
Seed1
Au0.382
Energy-23.6
Binding len21
Me-4.85
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure