Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTACGGTGAGGACTGGAGGGGGGCCGGTT
.((((((((((((((((.....&.)))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047447722
GeneSymbolTRAK1
Binding site3545,3574
Score1.0
Seed1
Au0.397
Energy-26.4
Binding len18
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure