Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTCACAGCCGAGCTGCGT
.(((((((.(((((((.((.(&).)).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047447722
GeneSymbolTRAK1
Binding site1653,1673
Score0.846
Seed1
Au0.382
Energy-23.3
Binding len20
Me-4.85
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure