Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATCACGTTGCAGCCGTCTTCCTTCCGAAACCTGCGGCTCCCCAAGAGGCTGCGT
.(((((((((((((((((.((&.)).))))))))))..............................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047447735
GeneSymbolSCAP
Binding site1639,1696
Score0.923
Seed1
Au0.368
Energy-24.6
Binding len52
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings38
Pairings in 3prime end7
PositionCDS
2D Structure