Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGCGACGGCATGCTGCT
..((((((((.(((((..(((&))).))))).))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047447735
GeneSymbolSCAP
Binding site2527,2547
Score0.846
Seed1
Au0.338
Energy-23.0
Binding len20
Me-7.782
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings5
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure