Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGCGCAACCTCTGGCAGCTT
....((((((((((((..(((&)))..))))))....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047447957
GeneSymbolSEC22A
Binding site951,973
Score0.846
Seed0
Au0.559
Energy-18.9
Binding len22
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure