Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGTATCAGACTGCT
..(((((((...(((((((((&)))))))))...))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047448216
GeneSymbolOPA1
Binding site1107,1128
Score0.923
Seed1
Au0.618
Energy-20.3
Binding len21
Me-12.371
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure