Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCTTCCCCGTTTAACCCACTGTGCTATAGTTGCGGG
((((((((((((((((((((.&))))))))))...................))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047448216
GeneSymbolOPA1
Binding site4646,4689
Score0.923
Seed1
Au0.529
Energy-20.1
Binding len43
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings33
Pairings in 3prime end7
Position3UTR
2D Structure