Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATTTGGAATGGAAGGCCAGGTT
(((((((...((.(.(((((((&))))))).).))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_047448306
GeneSymbolATP6V1A
Binding site2398,2422
Score0.885
Seed1
Au0.618
Energy-17.6
Binding len24
Me-10.575
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end7
Position3UTR
2D Structure