Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTGGTTACAGCCTGTGACATGGCGGGTGCAGC
(((((.(((((((((((((((&)))).....))))))).........)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047448306
GeneSymbolATP6V1A
Binding site257,293
Score0.846
Seed0
Au0.412
Energy-21.7
Binding len36
Me-5.839
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings20
Pairings in 3prime end8
PositionCDS
2D Structure