Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGACGCCGTGGCTGCC
..(((((((((((....(((.&)))....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047448350
GeneSymbolSEMA5B
Binding site2580,2599
Score0.846
Seed1
Au0.25
Energy-23.5
Binding len19
Me-6.782
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure