Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACAGCTGTGCGCTGCT
..((((((((((((((..(((&)))))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047448553
GeneSymbolIFT122
Binding site1469,1488
Score0.923
Seed1
Au0.412
Energy-21.5
Binding len19
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure