Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCAGAGTTCGTGCCAGTGG
(((((((....((((((((...&)))))))).....))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047448554
GeneSymbolIFT122
Binding site2240,2261
Score1.0
Seed1
Au0.382
Energy-23.4
Binding len21
Me-11.375
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end5
PositionCDS
2D Structure