Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCTTCTTCTCCCCACTCTCCCAGGCAACCTGGCTGCT
..(((((((.((((((..((.&.))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047448583
GeneSymbolSLC5A9
Binding site525,566
Score0.962
Seed1
Au0.368
Energy-21.2
Binding len19
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure