Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TATAACTGCTTGGCTGTAT
.((((((((((((((((....&)))))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047448607
GeneSymbolCCNL1
Binding site1148,1167
Score0.923
Seed1
Au0.618
Energy-20.1
Binding len19
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end4
Position3UTR
2D Structure