Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAGCTGTGGAAGGCT
..((..(((((((((((((((&)))))))))))))))...)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348549
GeneSymbolTMEM229B
Binding site1975,1996
Score0.846
Seed0
Au0.441
Energy-22.9
Binding len21
Me-10.977
Phylopstem-0.31341168666666663
Phylopflank0.16014833224999997
Longest consecutive pairings15
Position of longest consecutive pairings6
Pairings in 3prime end8
Position3UTR
2D Structure