Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCAACCAATACCTCCCCAGGGGCCTGCTGAGCTGCAGC
(((((((((((((((((((..&)))))))))...................))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348549
GeneSymbolTMEM229B
Binding site1241,1282
Score0.846
Seed1
Au0.338
Energy-22.5
Binding len41
Me-3.938
Phylopstem0.12178470999999998
Phylopflank-0.02563220749999999
Longest consecutive pairings9
Position of longest consecutive pairings32
Pairings in 3prime end6
Position3UTR
2D Structure