Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTACCTGAAAGTGACTTCTTACAGCTAGTGC
((((((((((((((.(((((((&)))))))))))).)).........))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330491
GeneSymbolBNIP3L
Binding site2647,2679
Score0.846
Seed1
Au0.588
Energy-20.0
Binding len32
Me-4.673
Phylopstem0.24795315416666663
Phylopflank0.8172862649999999
Longest consecutive pairings12
Position of longest consecutive pairings20
Pairings in 3prime end7
Position3UTR
2D Structure