Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCTTGGGATGCAGCTGTT
..(((((((((...((((((.&))))))......))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047448874
GeneSymbolCACNA1D
Binding site2549,2571
Score1.0
Seed1
Au0.588
Energy-22.1
Binding len22
Me-10.45
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure