Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCGGCCTGTGCTGATCTGCAGGTGTGAT
(((((.((((((((((((((.&))))))))))...........)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047448874
GeneSymbolCACNA1D
Binding site9551,9583
Score1.0
Seed0
Au0.441
Energy-21.4
Binding len32
Me-5.839
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings22
Pairings in 3prime end7
Position3UTR
2D Structure