Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCCGCAGATGTGAC
(((((.((((((((((.....&)))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047448877
GeneSymbolBRPF1
Binding site185,202
Score1.0
Seed0
Au0.515
Energy-21.2
Binding len17
Me-5.839
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end3
Position5UTR
2D Structure