Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTACCATGTTGGCCAGGC
.((((((..(((..(((((...&)))))..)))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001348660
GeneSymbolC16orf87
Binding site4693,4712
Score0.846
Seed1
Au0.544
Energy-18.7
Binding len19
Me-9.309
Phylopstem0.10827016666666667
Phylopflank0.026917675000000085
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure