Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGTACAGTCTTCCCAAGGTGATTCCTGCGACTGCAGG
......((((((((((.(((.&.))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330491
GeneSymbolBNIP3L
Binding site1795,1834
Score0.808
Seed0
Au0.515
Energy-19.1
Binding len15
Me-15.567
Phylopstem0.41297225
Phylopflank0.45994760899999987
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure