Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((...&.)))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001348660
GeneSymbolC16orf87
Binding site1764,1787
Score0.846
Seed1
Au0.382
Energy-27.3
Binding len22
Me-10.109
Phylopstem-0.042818845454545444
Phylopflank0.01266809375
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure