Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATTGAGTGTCGGC
..(((((((.(((((((((...&))))))))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_047449133
GeneSymbolB3GALNT1
Binding site556,574
Score0.923
Seed1
Au0.456
Energy-20.3
Binding len18
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end5
Position5UTR
2D Structure