Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACTACACTGCCAGTTGTAT
.(((((((((((.((((((((&))))..)))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047449133
GeneSymbolB3GALNT1
Binding site3577,3600
Score1.0
Seed1
Au0.618
Energy-19.5
Binding len23
Me-5.082
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure