Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTTCCTTTGTATGCCAGC
..(((((((((((.........&.))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_047449141
GeneSymbolHIPK1
Binding site4728,4746
Score1.0
Seed1
Au0.647
Energy-17.5
Binding len13
Me-6.782
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure