Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGTCCCTGGGGTTAGCCCTGTTGGCCCTGACAGGAAGGGAGGAAGCCTGGTGA
(((((((((((((((((((...&.))))........)))))))).))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047449141
GeneSymbolHIPK1
Binding site6822,6877
Score0.846
Seed1
Au0.397
Energy-23.7
Binding len31
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure