Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGACACACCGGCGGTATGGCATCACAGCTGCAAG
((((((((((((((((..(((&)))..))).))))..............))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047449141
GeneSymbolHIPK1
Binding site80,117
Score0.923
Seed1
Au0.426
Energy-22.4
Binding len37
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure