Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCGACTTCTGCTGCTGCAC
.((((((.((((..((..(((&)))...))..)))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047449141
GeneSymbolHIPK1
Binding site3341,3363
Score0.923
Seed1
Au0.471
Energy-21.0
Binding len22
Me-8.253
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure