Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACCGTGCCCGGCTGCAT
.((((((((.(((.....(((&))).....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348660
GeneSymbolC16orf87
Binding site5002,5022
Score1.0
Seed1
Au0.456
Energy-20.8
Binding len20
Me-6.861
Phylopstem-0.08234638575
Phylopflank0.44661544624999994
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure