Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCCTGAGTAGCTGTGAC
(((((((((((((((..((((&)))))))))......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001348660
GeneSymbolC16orf87
Binding site1839,1865
Score0.923
Seed1
Au0.426
Energy-20.8
Binding len26
Me-4.171
Phylopstem0.051341252380952385
Phylopflank0.029818758750000004
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure